{"id":23811,"date":"2019-06-26T17:53:48","date_gmt":"2019-06-26T16:53:48","guid":{"rendered":"http:\/\/blogs.ua.pt\/cidtff\/?p=23811"},"modified":"2019-06-26T17:53:48","modified_gmt":"2019-06-26T16:53:48","slug":"artigo-using-simulate-to-model-the-effects-of-antibiotic-selective-pressure-on-the-dynamics-of-pathogenic-bacterial-populations","status":"publish","type":"post","link":"https:\/\/cidtff.web.ua.pt\/blog\/?p=23811","title":{"rendered":"Artigo | Using SimulATe to model the effects of antibiotic selective pressure on the dynamics of pathogenic bacterial populations"},"content":{"rendered":"\n<div class=\"wp-block-image\"><figure class=\"alignright is-resized\"><a href=\"http:\/\/blogs.ua.pt\/cidtff\/wp-content\/uploads\/2019\/06\/biology_xana.png\" target=\"_blank\" rel=\"noreferrer noopener\"><img loading=\"lazy\" decoding=\"async\" src=\"http:\/\/blogs.ua.pt\/cidtff\/wp-content\/uploads\/2019\/06\/biology_xana.png\" alt=\"\" class=\"wp-image-23814\" width=\"265\" height=\"193\"\/><\/a><\/figure><\/div>\n\n\n\n<p class=\"wp-block-paragraph\"><strong>Pedro H. C. David, Xana S\u00e1-Pinto (CIDTFF) &amp; Teresa Nogueira | Biology Methods and Protocols, Volume 4, Issue 1<\/strong><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><strong>Abstract:<\/strong><\/p>\n\n\n\n<p class=\"wp-block-paragraph\">\u201cAntibiotics\nare notable weapons in fighting bacteria. Nowadays, however, the effectiveness\nof antibiotics is severely hindered by the increasing levels of antibiotic\nresistances in pathogenic bacterial populations, which can persist due to the\nselective pressure caused by antibiotic exposure. Arguably, the main cause of\nantibiotic resistances endurance in nature is antibiotic misuse, such as via\noverusing, inappropriate prescribing as well as the uncontrolled use in agriculture\nand livestock. There is also a lack of knowledge on appropriate antibiotic\nusage by the general public. Public scientific literacy and more research on\ntherapeutic practices are fundamental to tackle this problem. Here, we present\nSimulATe a software which allows the simulation of the effects of antibiotic\ntherapies on bacterial populations during human infections. This software can\nbe used to develop students\u2019 scientific literacy, using infections and\nantibiotic treatments as context to engage students in scientific practices,\nand discussions on antibiotic treatment onset and duration or on its use in\nimmunosuppressed or critically ill individuals. SimulATe\u2019s features also allow\nit to be used for research purposes allowing the simulation of real scenarios\nand exploration of their outcomes across the parameters\u2019 landscape.\u201d<\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><a href=\"https:\/\/doi.org\/10.1093\/biomethods\/bpz004\" target=\"_blank\" rel=\"noreferrer noopener\" aria-label=\"ver mais (opens in a new tab)\">ver mais<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><strong>&#8211; &#8211; &#8211; &#8211; &#8211;<\/strong><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><strong>Refer\u00eancia:<br \/> <\/strong>David, P. H. C., S\u00e1-Pinto, X., &amp; Nogueira, T. (2019). Using SimulATe to model the effects of antibiotic selective pressure on the dynamics of pathogenic bacterial populations. In Biology Methods and Protocols, Volume 4, Issue 1. doi: 10.1093\/biomethods\/bpz004. Retrieved from: <a href=\"https:\/\/doi.org\/10.1093\/biomethods\/bpz004\" target=\"_blank\" rel=\"noreferrer noopener\" aria-label=\" (opens in a new tab)\">https:\/\/doi.org\/10.1093\/biomethods\/bpz004<\/a><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Pedro H. C. David, Xana S\u00e1-Pinto (CIDTFF) &amp; Teresa Nogueira | Biology Methods and Protocols, Volume 4, Issue 1 Abstract: \u201cAntibiotics are notable weapons in fighting bacteria. Nowadays, however, the effectiveness of antibiotics is severely hindered by the increasing levels of antibiotic resistances in pathogenic bacterial populations, which can persist due to the selective pressure [&hellip;]<\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"footnotes":""},"categories":[32,14,5],"tags":[],"class_list":["post-23811","post","type-post","status-publish","format-standard","hentry","category-artigos","category-destaques","category-publicacoes"],"aioseo_notices":[],"aioseo_head":"\n\t\t<!-- All in One SEO 4.9.10 - aioseo.com -->\n\t<meta name=\"description\" content=\"Pedro H. C. David, Xana S\u00e1-Pinto (CIDTFF) &amp; Teresa Nogueira | Biology Methods and Protocols, Volume 4, Issue 1 Abstract: \u201cAntibiotics are notable weapons in fighting bacteria. Nowadays, however, the effectiveness of antibiotics is severely hindered by the increasing levels of antibiotic resistances in pathogenic bacterial populations, which can persist due to the selective pressure\" \/>\n\t<meta name=\"robots\" content=\"max-image-preview:large\" \/>\n\t<meta name=\"author\" content=\"cidtff\"\/>\n\t<link rel=\"canonical\" href=\"https:\/\/cidtff.web.ua.pt\/blog\/?p=23811\" \/>\n\t<meta name=\"generator\" content=\"All in One SEO (AIOSEO) 4.9.10\" \/>\n\t\t<meta property=\"og:locale\" content=\"en_US\" \/>\n\t\t<meta property=\"og:site_name\" content=\"CIDTFF blog -\" \/>\n\t\t<meta property=\"og:type\" content=\"article\" \/>\n\t\t<meta property=\"og:title\" content=\"Artigo | Using SimulATe to model the effects of antibiotic selective pressure on the dynamics of pathogenic bacterial populations - CIDTFF blog\" \/>\n\t\t<meta property=\"og:description\" content=\"Pedro H. C. David, Xana S\u00e1-Pinto (CIDTFF) &amp; Teresa Nogueira | Biology Methods and Protocols, Volume 4, Issue 1 Abstract: \u201cAntibiotics are notable weapons in fighting bacteria. Nowadays, however, the effectiveness of antibiotics is severely hindered by the increasing levels of antibiotic resistances in pathogenic bacterial populations, which can persist due to the selective pressure\" \/>\n\t\t<meta property=\"og:url\" content=\"https:\/\/cidtff.web.ua.pt\/blog\/?p=23811\" \/>\n\t\t<meta property=\"article:published_time\" content=\"2019-06-26T16:53:48+00:00\" \/>\n\t\t<meta property=\"article:modified_time\" content=\"2019-06-26T16:53:48+00:00\" \/>\n\t\t<meta property=\"article:publisher\" content=\"https:\/\/www.facebook.com\/cidtff\" \/>\n\t\t<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n\t\t<meta name=\"twitter:site\" content=\"@cidtff\" \/>\n\t\t<meta name=\"twitter:title\" content=\"Artigo | Using SimulATe to model the effects of antibiotic selective pressure on the dynamics of pathogenic bacterial populations - CIDTFF blog\" \/>\n\t\t<meta name=\"twitter:description\" content=\"Pedro H. C. David, Xana S\u00e1-Pinto (CIDTFF) &amp; Teresa Nogueira | Biology Methods and Protocols, Volume 4, Issue 1 Abstract: \u201cAntibiotics are notable weapons in fighting bacteria. Nowadays, however, the effectiveness of antibiotics is severely hindered by the increasing levels of antibiotic resistances in pathogenic bacterial populations, which can persist due to the selective pressure\" \/>\n\t\t<meta name=\"twitter:creator\" content=\"@cidtff\" \/>\n\t\t<script type=\"application\/ld+json\" class=\"aioseo-schema\">\n\t\t\t{\"@context\":\"https:\\\/\\\/schema.org\",\"@graph\":[{\"@type\":\"BlogPosting\",\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?p=23811#blogposting\",\"name\":\"Artigo | Using SimulATe to model the effects of antibiotic selective pressure on the dynamics of pathogenic bacterial populations - CIDTFF blog\",\"headline\":\"Artigo | Using SimulATe to model the effects of antibiotic selective pressure on the dynamics of pathogenic bacterial populations\",\"author\":{\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?author=2#author\"},\"publisher\":{\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/#organization\"},\"image\":{\"@type\":\"ImageObject\",\"url\":\"http:\\\/\\\/blogs.ua.pt\\\/cidtff\\\/wp-content\\\/uploads\\\/2019\\\/06\\\/biology_xana.png\",\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?p=23811\\\/#articleImage\"},\"datePublished\":\"2019-06-26T17:53:48+00:00\",\"dateModified\":\"2019-06-26T17:53:48+00:00\",\"inLanguage\":\"en-US\",\"mainEntityOfPage\":{\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?p=23811#webpage\"},\"isPartOf\":{\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?p=23811#webpage\"},\"articleSection\":\"Artigos, Destaques, Publica\\u00e7\\u00f5es\"},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?p=23811#breadcrumblist\",\"itemListElement\":[{\"@type\":\"ListItem\",\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog#listItem\",\"position\":1,\"name\":\"Home\",\"item\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\",\"nextItem\":{\"@type\":\"ListItem\",\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?cat=5#listItem\",\"name\":\"Publica\\u00e7\\u00f5es\"}},{\"@type\":\"ListItem\",\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?cat=5#listItem\",\"position\":2,\"name\":\"Publica\\u00e7\\u00f5es\",\"item\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?cat=5\",\"nextItem\":{\"@type\":\"ListItem\",\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?p=23811#listItem\",\"name\":\"Artigo | Using SimulATe to model the effects of antibiotic selective pressure on the dynamics of pathogenic bacterial populations\"},\"previousItem\":{\"@type\":\"ListItem\",\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog#listItem\",\"name\":\"Home\"}},{\"@type\":\"ListItem\",\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?p=23811#listItem\",\"position\":3,\"name\":\"Artigo | Using SimulATe to model the effects of antibiotic selective pressure on the dynamics of pathogenic bacterial populations\",\"previousItem\":{\"@type\":\"ListItem\",\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?cat=5#listItem\",\"name\":\"Publica\\u00e7\\u00f5es\"}}]},{\"@type\":\"Organization\",\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/#organization\",\"name\":\"CIDTFF blog\",\"url\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/\",\"sameAs\":[\"https:\\\/\\\/www.facebook.com\\\/cidtff\",\"https:\\\/\\\/x.com\\\/cidtff\",\"https:\\\/\\\/www.youtube.com\\\/@cidtff\"]},{\"@type\":\"Person\",\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?author=2#author\",\"url\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?author=2\",\"name\":\"cidtff\",\"image\":{\"@type\":\"ImageObject\",\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?p=23811#authorImage\",\"url\":\"https:\\\/\\\/secure.gravatar.com\\\/avatar\\\/3f1c9d8414042003bf06f0bb5f9ad6b4d238a5eb1983b88c615fd2afe17b314c?s=96&d=mm&r=g\",\"width\":96,\"height\":96,\"caption\":\"cidtff\"}},{\"@type\":\"WebPage\",\"@id\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?p=23811#webpage\",\"url\":\"https:\\\/\\\/cidtff.web.ua.pt\\\/blog\\\/?p=23811\",\"name\":\"Artigo | Using SimulATe to model the effects of antibiotic selective pressure on the dynamics of pathogenic bacterial populations - CIDTFF blog\",\"description\":\"Pedro H. 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C. David, Xana S\u00e1-Pinto (CIDTFF) &amp; Teresa Nogueira | Biology Methods and Protocols, Volume 4, Issue 1 Abstract: \u201cAntibiotics are notable weapons in fighting bacteria. Nowadays, however, the effectiveness of antibiotics is severely hindered by the increasing levels of antibiotic resistances in pathogenic bacterial populations, which can persist due to the selective pressure","og:url":"https:\/\/cidtff.web.ua.pt\/blog\/?p=23811","article:published_time":"2019-06-26T16:53:48+00:00","article:modified_time":"2019-06-26T16:53:48+00:00","article:publisher":"https:\/\/www.facebook.com\/cidtff","twitter:card":"summary_large_image","twitter:site":"@cidtff","twitter:title":"Artigo | Using SimulATe to model the effects of antibiotic selective pressure on the dynamics of pathogenic bacterial populations - CIDTFF blog","twitter:description":"Pedro H. C. 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